5AVG
The 0.95 angstrom structure of thaumatin crystallized in high-strength agarose hydrogel
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SPRING-8 BEAMLINE BL44XU |
| Synchrotron site | SPring-8 |
| Beamline | BL44XU |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-12-08 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 0.90000 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 57.839, 57.839, 149.552 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 53.950 - 0.950 |
| R-factor | 0.1278 |
| Rwork | 0.127 |
| R-free | 0.14402 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2vhk |
| RMSD bond length | 0.025 |
| RMSD bond angle | 2.221 |
| Data reduction software | DENZO |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 53.950 | 0.970 |
| High resolution limit [Å] | 0.950 | 0.950 |
| Rmerge | 0.054 | 0.350 |
| Number of reflections | 148780 | |
| <I/σ(I)> | 21.5 | 2.25 |
| Completeness [%] | 92.9 | 56 |
| Redundancy | 7.5 | 2.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 7 | 293 | 0.1 M Hepes-NaOH (pH 7.0), 0.33 M Na/K tartrate |
