5AVD
The 0.86 angstrom structure of elastase crystallized in high-strength agarose hydrogel
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
| Synchrotron site | Photon Factory |
| Beamline | AR-NW12A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2009-01-20 |
| Detector | ADSC QUANTUM 210 |
| Wavelength(s) | 0.90000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 49.992, 58.210, 74.425 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 45.850 - 0.860 |
| R-factor | 0.1286 |
| Rwork | 0.128 |
| R-free | 0.13988 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1gvk |
| RMSD bond length | 0.047 |
| RMSD bond angle | 2.380 |
| Data reduction software | DENZO |
| Data scaling software | HKL-2000 |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 50.000 | 0.870 |
| High resolution limit [Å] | 0.860 | 0.860 |
| Rmerge | 0.088 | 0.612 |
| Number of reflections | 174535 | |
| <I/σ(I)> | 10.3 | 2.2 |
| Completeness [%] | 94.7 | 77.1 |
| Redundancy | 10.8 | 5.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | MICROBATCH | 5 | 293 | 0.1 M Na acetate (pH 5.0), 0.03 M (NH4)2SO4 |
