5AMJ
Cereblon isoform 4 from Magnetospirillum gryphiswaldense in complex with Thalidomide, Wash II structure
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-12 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 57.350, 59.430, 86.040 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.240 - 1.750 |
R-factor | 0.1567 |
Rwork | 0.155 |
R-free | 0.19053 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4v2y |
RMSD bond length | 0.018 |
RMSD bond angle | 2.397 |
Data reduction software | XDS |
Data scaling software | XDS |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 37.200 | 1.860 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.070 | 0.480 |
Number of reflections | 30163 | |
<I/σ(I)> | 9.79 | 2.16 |
Completeness [%] | 97.7 | 96.5 |
Redundancy | 2.86 | 2.79 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 100 MM TRI-SODIUM CITRATE PH 5.6, 1.0 M AMMONIUM PHOSPHATE |