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4ZXR

Structure of Thaumatin wrapped in graphene within vacuum

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]295
Detector technologyPIXEL
Collection date2014-11-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9795
Spacegroup nameP 41 21 2
Unit cell lengths59.079, 59.079, 151.220
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.780 - 1.920
R-factor0.1476
Rwork0.146
R-free0.17480
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1KWN
RMSD bond length0.022
RMSD bond angle2.182
Data reduction softwareXDS
Data scaling softwareAimless (0.3.11)
Refinement softwareREFMAC (5.8.0107)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]41.78041.7801.970
High resolution limit [Å]1.9209.0101.920
Rmerge0.0590.0300.580
Rpim0.0340.0180.341
Total number of observations731077124986
Number of reflections20125
<I/σ(I)>10.629.62
Completeness [%]95.983.698.8
Redundancy3.63.43.6
CC(1/2)0.9980.9990.745
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.8293Commercial thaumatin from Thaumatococcus danielli (Sigma-Aldrich) was resuspended in Milli-Q water to a concentration of 40 mg/mL. Sitting drops were made by mixing 4 uL of protein solution and 2 uL of reservoir solution [50 mM N-(2-Acetamido)iminodiacetic acid(ADA) pH 6.8, 600 mM potassium sodium tartrate and 20 % (v/v) Glycerol] and equilibrated against 500 uL of reservoir solution at 293K.

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