4ZXR
Structure of Thaumatin wrapped in graphene within vacuum
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | DIAMOND BEAMLINE I04 |
| Synchrotron site | Diamond |
| Beamline | I04 |
| Temperature [K] | 295 |
| Detector technology | PIXEL |
| Collection date | 2014-11-27 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 59.079, 59.079, 151.220 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 41.780 - 1.920 |
| R-factor | 0.1476 |
| Rwork | 0.146 |
| R-free | 0.17480 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1KWN |
| RMSD bond length | 0.022 |
| RMSD bond angle | 2.182 |
| Data reduction software | XDS |
| Data scaling software | Aimless (0.3.11) |
| Refinement software | REFMAC (5.8.0107) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 41.780 | 41.780 | 1.970 |
| High resolution limit [Å] | 1.920 | 9.010 | 1.920 |
| Rmerge | 0.059 | 0.030 | 0.580 |
| Rpim | 0.034 | 0.018 | 0.341 |
| Total number of observations | 73107 | 712 | 4986 |
| Number of reflections | 20125 | ||
| <I/σ(I)> | 10.6 | 29.6 | 2 |
| Completeness [%] | 95.9 | 83.6 | 98.8 |
| Redundancy | 3.6 | 3.4 | 3.6 |
| CC(1/2) | 0.998 | 0.999 | 0.745 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.8 | 293 | Commercial thaumatin from Thaumatococcus danielli (Sigma-Aldrich) was resuspended in Milli-Q water to a concentration of 40 mg/mL. Sitting drops were made by mixing 4 uL of protein solution and 2 uL of reservoir solution [50 mM N-(2-Acetamido)iminodiacetic acid(ADA) pH 6.8, 600 mM potassium sodium tartrate and 20 % (v/v) Glycerol] and equilibrated against 500 uL of reservoir solution at 293K. |






