4ZW8
X-ray crystal structure of PfA-M1 in complex with hydroxamic acid-based inhibitor 9r
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-14 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.530, 109.110, 118.400 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.688 - 2.000 |
R-factor | 0.1757 |
Rwork | 0.174 |
R-free | 0.21030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ebg |
RMSD bond length | 0.003 |
RMSD bond angle | 0.699 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.3.8) |
Phasing software | PHASES |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 35.690 | 35.690 | 2.050 |
High resolution limit [Å] | 2.000 | 9.380 | 2.000 |
Rmerge | 0.158 | 0.053 | 1.191 |
Rpim | 0.065 | 0.024 | 0.513 |
Total number of observations | 447176 | 4287 | 26815 |
Number of reflections | 66805 | ||
<I/σ(I)> | 8.5 | 21.1 | 1.5 |
Completeness [%] | 99.9 | 98.4 | 99.7 |
Redundancy | 6.7 | 5.8 | 6 |
CC(1/2) | 0.994 | 0.989 | 0.593 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 22% (v/v) PEG 8000, 10% (v/v) glycerol, 0.1 M Tris pH 8.5, 0.2 M MgCl2 |