4ZW7
X-ray crystal structure of PfA-M1 in complex with hydroxamic acid-based inhibitor 9m
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-14 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 75.190, 109.090, 118.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.729 - 1.950 |
R-factor | 0.1634 |
Rwork | 0.161 |
R-free | 0.20650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ebg |
RMSD bond length | 0.008 |
RMSD bond angle | 1.056 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.3.8) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 31.960 | 31.960 | 1.990 |
High resolution limit [Å] | 1.950 | 9.350 | 1.950 |
Rmerge | 0.189 | 0.035 | 1.156 |
Rpim | 0.075 | 0.016 | 0.468 |
Total number of observations | 514737 | 4320 | 31337 |
Number of reflections | 71596 | ||
<I/σ(I)> | 10 | 31.7 | 1.7 |
Completeness [%] | 100.0 | 97.6 | 100 |
Redundancy | 7.2 | 5.9 | 6.9 |
CC(1/2) | 0.994 | 0.999 | 0.569 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 298 | 22% (v/v) PEG 8000, 10% (v/v) glycerol, 0.1 M Tris pH 8.5, 0.2 M MgCl2 |