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4ZNZ

Crystal structure of Escherichia coli carbonic anhydrase (YadF) in complex with Zn - artifact of purification

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2013-06-20
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)1.27822
Spacegroup nameP 42 21 2
Unit cell lengths67.909, 67.909, 84.930
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.700
R-factor0.1534
Rwork0.149
R-free0.25750
Structure solution methodSAD
RMSD bond length0.012
RMSD bond angle1.591
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwareREFMAC (5.8.0107)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.750
High resolution limit [Å]2.7007.3202.700
Rmerge0.1220.0390.926
Rmeas0.1300.0420.988
Rpim0.0450.0150.338
Total number of observations44824
Number of reflections5527
<I/σ(I)>6.51.8
Completeness [%]93.686.695.8
Redundancy8.17.38.1
CC(1/2)0.9980.752
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72890.3 ul of 7.4 mg/ml protein in 50 mM TRIS pH 7.9, 200 mM NaCl and 0.5 mM TCEP were mixed with the 0.3 ul of SaltRx condition #96 (60% v/v Tacsimate pH 7.0 and 0.1 M BIS-TRIS propane pH 7.0) and equilibrated against SaltRx condition #96 solution in 96 Well 3 drop Crystallization Plate (Swissci)

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PDB entries from 2024-05-15

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