Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4ZI4

YopH W354H Yersinia enterocolitica PTPase bond with Divanadate glycerol ester in the active site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]98
Detector technologyCCD
Collection date2012-07-18
DetectorADSC QUANTUM 315r
Wavelength(s)0.97946
Spacegroup nameP 21 21 21
Unit cell lengths52.888, 60.512, 89.358
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.262 - 1.121
R-factor0.1418
Rwork0.141
R-free0.15940
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ypt
RMSD bond length0.008
RMSD bond angle1.291
Data reduction softwareAUTOMAR
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.160
High resolution limit [Å]1.1201.120
Rmerge0.0640.723
Number of reflections109639
<I/σ(I)>52.810.4
Completeness [%]99.499.2
Redundancy11.410.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298Peg 3350, HEPES

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon