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4Z9K

Ricin A chain bound to camelid nanobody (VHH2)(F5)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2015-02-27
DetectorADSC QUANTUM 315
Wavelength(s)0.98
Spacegroup nameC 2 2 21
Unit cell lengths78.376, 107.085, 111.944
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.065 - 1.500
R-factor0.1786
Rwork0.178
R-free0.19540
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.019
RMSD bond angle1.682
Data reduction softwareXDS
Data scaling softwareAimless (0.3.3)
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]111.940111.9401.530
High resolution limit [Å]1.5008.2201.500
Rmerge0.0830.0461.497
Rpim0.0350.0210.624
Total number of observations480384312023799
Number of reflections75050
<I/σ(I)>1238.81.4
Completeness [%]99.699.899
Redundancy6.45.96.6
CC(1/2)0.9980.9960.535
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5295100 mM Tris, 15% PEG 3000, 2 mM Zinc acetate, 10 mM sulfobetaine

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