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4Z82

Cysteine bound rat cysteine dioxygenase C164S variant at pH 8.1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]93
Detector technologyIMAGE PLATE
Collection date2014-11-24
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54187
Spacegroup nameP 43 21 2
Unit cell lengths58.020, 58.020, 122.230
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.880 - 1.700
R-factor0.1791
Rwork0.178
R-free0.20610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4kwj
RMSD bond length0.008
RMSD bond angle1.102
Data reduction softwareiMOSFLM (7.1.0)
Data scaling softwared*TREK
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX (1.9-1692)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]23.88023.8801.730
High resolution limit [Å]1.7008.8301.700
Rmerge0.0580.0300.832
Rpim0.0170.0090.248
Total number of observations282218200913606
Number of reflections22847
<I/σ(I)>23.653.62.3
Completeness [%]96.795.293.1
Redundancy12.49.811.6
CC(1/2)0.9991.0000.843
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.3291Hanging drops of 2 microL of 50 mg/mL C164S-CDO (10 mM sodium phosphate, 20 mM NaCl, pH 7.5) and 2 microL reservoir buffer containing seeds from WT-CDO were allowed to equilibrate above the reservoir buffer (26% (w/v) polyethylene glycol 4000, 200 mM ammonium acetate, 100 mM sodium citrate)

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PDB entries from 2024-05-15

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