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4Z6D

Structure of human DNA polymerase beta 279NA mutant complexed with G in the template base paired with incoming non-hydrolyzable TTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2014-02-15
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths54.283, 79.382, 54.859
Unit cell angles90.00, 110.18, 90.00
Refinement procedure
Resolution19.846 - 2.510
R-factor0.2013
Rwork0.198
R-free0.26960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2fms
RMSD bond length0.004
RMSD bond angle1.063
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 Overall
Low resolution limit [Å]20.000
High resolution limit [Å]2.510
Number of reflections15005
<I/σ(I)>12.7
Completeness [%]99.9
Redundancy4.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529814% to 23% PEG3400, and 350 mM sodium acetate in 50 mM imidazole (pH 7.5)

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PDB entries from 2024-05-15

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