Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Z6B

YopH W354H Yersinia enterocolitica PTPase in the apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-3
Synchrotron siteSSRL
BeamlineBL9-3
Temperature [K]100
Detector technologyCCD
Collection date2012-07-18
DetectorADSC QUANTUM 315r
Wavelength(s)0.97946
Spacegroup nameP 21 21 21
Unit cell lengths52.888, 60.512, 89.358
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000 - 1.200
R-factor0.141
Rwork0.140
R-free0.15900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3f99
RMSD bond length0.009
RMSD bond angle1.345
Data reduction softwareAUTOMAR
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.240
High resolution limit [Å]1.2001.200
Rmerge0.0960.530
Number of reflections90707
<I/σ(I)>24.95.2
Completeness [%]99.497.4
Redundancy14.112.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5294PEG 3350, HEPES

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon