Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Z5Z

The 2.5-angstrom crystal structure of Mg(2+)-bound PqqB from Pseudomonas Putida

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]108
Detector technologyCCD
Collection date2014-02-22
DetectorADSC QUANTUM 210r
Wavelength(s)0.979
Spacegroup nameP 43 21 2
Unit cell lengths86.150, 86.150, 106.959
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.894 - 2.540
R-factor0.19
Rwork0.188
R-free0.22380
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.699
Data reduction softwareHKL-3000
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.5.1)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0002.580
High resolution limit [Å]2.5406.8702.540
Rmerge0.1440.0860.472
Rmeas0.1560.0920.522
Rpim0.0570.0330.217
Total number of observations84784
Number of reflections13539
<I/σ(I)>5.9
Completeness [%]97.393.897.1
Redundancy6.374.9
CC(1/2)0.9860.687
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.729811% PEG4000, 0.2M NaCl, 1mM MgCl2, 1mM Malic acid, 0.1M Bis-Tris Propane

229380

PDB entries from 2024-12-25

PDB statisticsPDBj update infoContact PDBjnumon