4YZP
Crystal structure of a tri-modular GH5 (subfamily 4) endo-beta-1, 4-glucanase from Bacillus licheniformis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-04-18 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9724 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 90.700, 90.700, 120.630 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 64.130 - 1.700 |
R-factor | 0.1678 |
Rwork | 0.166 |
R-free | 0.19760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ndy |
RMSD bond length | 0.007 |
RMSD bond angle | 1.055 |
Data reduction software | MOSFLM (7.1.3) |
Data scaling software | Aimless (0.5.7) |
Phasing software | PHASER (2.5.7) |
Refinement software | PHENIX (1.9-1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 64.130 | 64.130 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.078 | 0.035 | 0.552 |
Rpim | 0.058 | 0.025 | 0.417 |
Total number of observations | 127819 | 1076 | 6897 |
Number of reflections | 52079 | ||
<I/σ(I)> | 7.1 | 17.4 | 1.7 |
Completeness [%] | 94.1 | 91.4 | 95.9 |
Redundancy | 2.5 | 2.7 | 2.5 |
CC(1/2) | 0.991 | 0.996 | 0.571 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 291 | 22.5 % PEG 4000, 14 % isopropanol and 0.1 M sodium citrate |