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4YX5

SpaO(SPOA1,2)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2013-11-22
DetectorADSC QUANTUM 315r
Wavelength(s)1.075, 0.979
Spacegroup nameP 41 21 2
Unit cell lengths65.760, 65.760, 95.650
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.678 - 2.900
R-factor0.2187
Rwork0.212
R-free0.27910
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.324
Data scaling softwareAimless (0.2.7)
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]54.19054.1903.080
High resolution limit [Å]2.9008.7002.900
Rmerge0.1660.1091.447
Rpim0.0340.0240.283
Total number of observations122494457120277
Number of reflections4975
<I/σ(I)>14.426.92.7
Completeness [%]99.395.299.3
Redundancy24.621.226.2
CC(1/2)0.9960.9950.856
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277SpaO(145-213) + SpaO (232-297) was concentrated to 12mg/mL and crystallized with 25% PEG400, 10% isopropanol, 100mM sodium citrate pH=5.6 at 277K. Microseeding was employed to enhance crystal uniformity and diffraction. Briefly, crystals to be seeded were harvested in precipitant solution and vortexed in a microfuge tube with a small stir bar for ~60 seconds. The slurry of microseeds was serially dilluted (5-10-fold steps) in precipitant solution and 5 selected microseed-precipitant mixtures were mixed with fresh protein as in a normal hanging drop experiment. Crystals were cryoprotected in mother liquor with the PEG400 concentration raised to 37.5%.

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