4YWH
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM ACTINOBACILLUS SUCCINOGENES 130Z (Asuc_0499, TARGET EFI-511068) WITH BOUND D-XYLOSE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-11 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.796, 37.670, 105.336 |
Unit cell angles | 90.00, 91.50, 90.00 |
Refinement procedure
Resolution | 24.838 - 2.350 |
R-factor | 0.1607 |
Rwork | 0.157 |
R-free | 0.23820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ma0 |
RMSD bond length | 0.014 |
RMSD bond angle | 1.410 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 24.838 | 500.000 | 2.390 |
High resolution limit [Å] | 2.350 | 6.380 | 2.350 |
Rmerge | 0.083 | 0.048 | 0.750 |
Rmeas | 0.093 | 0.053 | 0.855 |
Rpim | 0.040 | 0.022 | 0.399 |
Total number of observations | 133133 | ||
Number of reflections | 26617 | ||
<I/σ(I)> | 9 | ||
Completeness [%] | 97.6 | 97.7 | 89.7 |
Redundancy | 5 | 5.3 | 3.9 |
CC(1/2) | 0.993 | 0.764 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Protein (10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Xylose); Reservoir (MCSG1 G4)(0.2 M Potassium Sodium Tartrate, 20 %(w/v) PEG 3350); Cryoprotection (20% Ethylene Glycol, 80% Reservoir) |