4YV7
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEI_3018, TARGET EFI-511327) WITH BOUND GLYCEROL
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-11 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 99.246, 110.626, 35.929 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.337 - 2.300 |
R-factor | 0.1796 |
Rwork | 0.177 |
R-free | 0.23770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ioy |
RMSD bond length | 0.014 |
RMSD bond angle | 1.322 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.080 | 0.058 | 0.425 |
Rmeas | 0.094 | 0.070 | 0.504 |
Rpim | 0.049 | 0.037 | 0.265 |
Total number of observations | 51448 | ||
Number of reflections | 16739 | ||
<I/σ(I)> | 8.4 | ||
Completeness [%] | 90.7 | 92.3 | 87.5 |
Redundancy | 3.1 | 2.9 | 3.1 |
CC(1/2) | 0.974 | 0.882 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | Protein (10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Ribose); Reservoir (MCSG2 G2)(0.1 M Tris pH 8.5, 2.4 M di-Ammonium Phosphate); Cryoprotection (20% Glycerol, 80% Reservoir) |