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4YV7

CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM MYCOBACTERIUM SMEGMATIS (MSMEI_3018, TARGET EFI-511327) WITH BOUND GLYCEROL

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-02-11
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 21 21 2
Unit cell lengths99.246, 110.626, 35.929
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.337 - 2.300
R-factor0.1796
Rwork0.177
R-free0.23770
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ioy
RMSD bond length0.014
RMSD bond angle1.322
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.000100.0002.340
High resolution limit [Å]2.3006.2402.300
Rmerge0.0800.0580.425
Rmeas0.0940.0700.504
Rpim0.0490.0370.265
Total number of observations51448
Number of reflections16739
<I/σ(I)>8.4
Completeness [%]90.792.387.5
Redundancy3.12.93.1
CC(1/2)0.9740.882
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5298Protein (10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Ribose); Reservoir (MCSG2 G2)(0.1 M Tris pH 8.5, 2.4 M di-Ammonium Phosphate); Cryoprotection (20% Glycerol, 80% Reservoir)

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PDB entries from 2024-05-15

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