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4YQZ

Crystal Structure of a putative oxidoreductase from Thermus Thermophilus HB27 (TT_P0034, TARGET EFI-513932) in its APO form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-02-24
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 1 21 1
Unit cell lengths76.436, 65.752, 85.759
Unit cell angles90.00, 95.43, 90.00
Refinement procedure
Resolution25.091 - 1.807
R-factor0.1666
Rwork0.164
R-free0.20950
Structure solution methodSAD
RMSD bond length0.007
RMSD bond angle1.078
Data reduction softwareHKL-3000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.000100.0001.830
High resolution limit [Å]1.8004.8901.800
Rmerge0.0660.0370.935
Rmeas0.0690.040
Rpim0.0260.0150.370
Total number of observations573677
Number of reflections76823
<I/σ(I)>9.8
Completeness [%]99.295.398.8
Redundancy7.57.47.2
CC(1/2)0.9960.802
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5298Protein, 10mM NAD; Reservoir (0.2 M Calcium chloride, 0.1M Tris: HCl, pH 8.50, 25%(w/v) PEG 4000); Cryoprotection (20% Diethylene glycol, 80% Reservoir)

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PDB entries from 2024-05-15

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