Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4YPV

High-resolution structure of a metagenome-derived esterase Est8

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I02
Synchrotron siteDiamond
BeamlineI02
Temperature [K]100
Detector technologyPIXEL
Collection date2013-10-24
DetectorPSI PILATUS 6M
Wavelength(s)0.919
Spacegroup nameP 31 2 1
Unit cell lengths85.496, 85.496, 98.665
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution27.985 - 1.850
R-factor0.1513
Rwork0.150
R-free0.18060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1evq
RMSD bond length0.006
RMSD bond angle0.986
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]27.9851.960
High resolution limit [Å]1.8501.850
Rmerge0.0460.571
Number of reflections35630
<I/σ(I)>14.442.23
Completeness [%]98.497.1
Redundancy3.473.53
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP92911% PEG 8000, 1.4 M Triammonium citrate

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon