4YP0
Crystal structure of T. cruzi Histidyl-tRNA synthetase in complex with 5-aminoisoquinoline (Chem 79)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-05 |
Detector | RIGAKU SATURN 944 |
Wavelength(s) | 1.54 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 64.811, 118.873, 65.897 |
Unit cell angles | 90.00, 92.93, 90.00 |
Refinement procedure
Resolution | 33.950 - 2.100 |
R-factor | 0.1901 |
Rwork | 0.188 |
R-free | 0.22610 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lc0 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.097 |
Data reduction software | XDS |
Data scaling software | Aimless (0.1.27) |
Phasing software | REFMAC |
Refinement software | REFMAC (refmac_5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.950 | 33.950 | 2.160 |
High resolution limit [Å] | 2.100 | 8.910 | 2.100 |
Rmerge | 0.053 | 0.019 | 0.502 |
Rpim | 0.035 | 0.012 | 0.402 |
Total number of observations | 83516 | 1105 | 3729 |
Number of reflections | 27636 | ||
<I/σ(I)> | 15.7 | 64.2 | 1.8 |
Completeness [%] | 95.2 | 89.3 | 72.4 |
Redundancy | 3 | 3.1 | 2.2 |
CC(1/2) | 0.999 | 0.999 | 0.690 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 0.2 M ammonium sulfate, 23 % to 28 % PEG 3350, 0.1 M sodium citrate pH 4.8 to 5.3, 1 mM TCEP |