4YNT
Crystal structure of Aspergillus flavus FAD glucose dehydrogenase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-20 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 49.907, 64.359, 76.166 |
Unit cell angles | 90.00, 101.43, 90.00 |
Refinement procedure
Resolution | 48.750 - 1.780 |
R-factor | 0.1556 |
Rwork | 0.153 |
R-free | 0.19900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1cf3 |
RMSD bond length | 0.006 |
RMSD bond angle | 1.028 |
Data reduction software | SCALEPACK |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.800 |
High resolution limit [Å] | 1.770 | 4.800 | 1.770 |
Rmerge | 0.071 | 0.054 | 0.462 |
Total number of observations | 143309 | ||
Number of reflections | 45130 | ||
<I/σ(I)> | 15.2 | 2.4 | |
Completeness [%] | 99.0 | 99.7 | 93.4 |
Redundancy | 3.2 | 3.7 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1 M BisTris, 20-25 % PEG 3350 |