4YEN
Room temperature X-ray diffraction studies of cisplatin binding to HEWL in DMSO media after 14 months of crystal storage - new refinement
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 295 |
Detector technology | CCD |
Collection date | 2012-01-25 |
Detector | APEX II CCD |
Wavelength(s) | 1.5418 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 79.113, 79.113, 37.985 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.000 |
R-factor | 0.1481 |
Rwork | 0.146 |
R-free | 0.17880 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4G4A |
RMSD bond length | 0.013 |
RMSD bond angle | 1.578 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
Rmerge | 0.086 | 0.031 | 0.571 |
Rmeas | 0.092 | 0.033 | 0.630 |
Rpim | 0.032 | 0.010 | 0.264 |
Total number of observations | 68208 | ||
Number of reflections | 8602 | ||
<I/σ(I)> | 8.8 | 2.7 | |
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 7.9 | 11 | 5.6 |
CC(1/2) | 1.000 | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 4.7 | 295 | HEWL co-crystallized with cisplatin with 5% DMSO media in 1 mL 10% sodium chloride + 1 ml 0.04 M sodium acetate, pH 4.7 |