4YCI
non-latent pro-bone morphogenetic protein 9
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-02-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 120.280, 120.280, 221.310 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.863 - 3.250 |
R-factor | 0.2406 |
Rwork | 0.240 |
R-free | 0.25990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ycg |
RMSD bond length | 0.002 |
RMSD bond angle | 0.616 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.330 |
High resolution limit [Å] | 3.250 | 14.530 | 3.250 |
Rmerge | 0.133 | 0.042 | 3.394 |
Rmeas | 0.154 | 0.051 | 3.905 |
Total number of observations | 119773 | ||
Number of reflections | 29711 | 365 | 2147 |
<I/σ(I)> | 8.36 | 29.11 | 0.53 |
Completeness [%] | 99.5 | 90.8 | 99.7 |
Redundancy | 4.03 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.8 | 277 | 0.15 M zinc acetate, 0.1 M sodium cacodylate pH 5.8, 4% isopropanol, 0.15 M nondetergent sulfobetaine (NDSB-211) |