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4Y6N

Crystal structure of glucosyl-3-phosphoglycerate synthase from Mycobacterium tuberculosis in complex with Mn2+, uridine-diphosphate-glucose (UDP-Glc) and phosphoglyceric acid (PGA) - GpgS Mn2+ UDP-Glc PGA-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2013-05-22
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97625
Spacegroup nameI 41
Unit cell lengths98.730, 98.730, 127.570
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.009 - 2.348
R-factor0.1744
Rwork0.173
R-free0.19980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4dec
RMSD bond length0.013
RMSD bond angle1.314
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.0102.432
High resolution limit [Å]2.3482.348
Rmerge0.0430.612
Number of reflections25437
<I/σ(I)>13.541.5
Completeness [%]99.897.87
Redundancy6.79.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529114% PEG 8,000, 0.3-0.5 M Li sulfate

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