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4XYP

Crystal structure of a piscine viral fusion protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2013-12-14
DetectorRAYONIX MX-300
Wavelength(s)0.979490
Spacegroup nameH 3 2
Unit cell lengths42.874, 42.874, 232.245
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution38.707 - 2.100
R-factor0.201
Rwork0.196
R-free0.25110
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.234
Data scaling softwareAimless (0.1.27)
Phasing softwarePHASER (2.5.3)
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]38.71038.7102.160
High resolution limit [Å]2.1008.9202.100
Rmerge0.0660.0360.495
Rpim0.0320.0230.247
Total number of observations237963251453
Number of reflections5037
<I/σ(I)>13.727.83.2
Completeness [%]97.693.888.6
Redundancy4.73.74
CC(1/2)0.9990.9990.833
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.52931:1 volume ratio of 30mg/mL protein solution and 0.2 M lithium sulfate, 0.1 M sodium acetate, pH 4.5, 2 mg/mL tetramethylthionine chloride and 50% (v/v) PEG 400

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PDB entries from 2024-05-15

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