4XY3
Structure of ESX-1 secreted protein EspB
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-03-15 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 72.110, 146.490, 94.220 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.110 - 3.040 |
R-factor | 0.2223 |
Rwork | 0.220 |
R-free | 0.26600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xxn |
RMSD bond length | 0.008 |
RMSD bond angle | 1.220 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.110 | 3.200 | |
High resolution limit [Å] | 3.040 | 13.600 | 3.040 |
Rmerge | 0.135 | 0.056 | 0.917 |
Rmeas | 0.151 | 0.062 | 1.170 |
Total number of observations | 47924 | ||
Number of reflections | 9487 | 114 | 686 |
<I/σ(I)> | 8.99 | 19.98 | 1.73 |
Completeness [%] | 95.7 | 85.1 | 97.5 |
Redundancy | 5.05 | 5.05 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 10.8 | 298 | 0.1M CAPSO, PH 10.8, 0.2M sodium chloride, 1.5M ammonium sulfate |