4XUL
Crystal structure of M. chilensis Mg662 protein complexed with GTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-10-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9801 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 99.360, 99.360, 168.994 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.880 - 2.260 |
R-factor | 0.1922 |
Rwork | 0.191 |
R-free | 0.21710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB 4AMS |
RMSD bond length | 0.003 |
RMSD bond angle | 0.752 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.5) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 168.990 | 168.990 | 2.610 |
High resolution limit [Å] | 2.260 | 4.520 | 2.260 |
Rmerge | 0.127 | 0.109 | 0.689 |
Rpim | 0.037 | 0.033 | 0.195 |
Total number of observations | 529090 | 65835 | 184276 |
Number of reflections | 40442 | ||
<I/σ(I)> | 13 | 24 | 4 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 13.1 | 12.2 | 13.3 |
CC(1/2) | 0.993 | 0.990 | 0.933 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 293 | Protein concentration: 5-12 mg/mL in 10 mM CAPS, 150 mM NaCl, pH 10.5 Reservoir solution: 0.05 M MES, 0.08 M Ammonium acetate pH 6.4 Soaking 0.5 mM GTP, UV treatment 5 minutes |