4XQM
Crystal structure of the MRH domain of Glucosidase II beta bound to mannose
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 |
| Temperature [K] | 98 |
| Detector technology | IMAGE PLATE |
| Collection date | 2013-07-01 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.54 |
| Spacegroup name | I 4 |
| Unit cell lengths | 57.571, 57.571, 58.321 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 29.161 - 1.625 |
| R-factor | 0.1703 |
| Rwork | 0.167 |
| R-free | 0.19690 |
| Structure solution method | SAD |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.396 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | SHELX |
| Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.650 |
| High resolution limit [Å] | 1.620 | 4.400 | 1.620 |
| Rmerge | 0.064 | 0.030 | 0.395 |
| Total number of observations | 153936 | ||
| Number of reflections | 12000 | ||
| <I/σ(I)> | 14.5 | ||
| Completeness [%] | 99.0 | 99.7 | 79.6 |
| Redundancy | 12.8 | 14.3 | 3.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 8.25 | 292 | 10mg/ml protein in 20mM Tris pH 7.5, 150mM NaCl, 100mM mannose mixed 1:1 with 100 mM triethanolamine HCl pH 8.25, 200 mM potassium glutamate, 28% PEG 4000 |






