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4XQ9

Crystal Structure of the Homospermidine Synthase (HSS) from Blastochloris viridis in Complex with NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2012-05-01
DetectorADSC QUANTUM 315
Wavelength(s)0.9763
Spacegroup nameP 2 21 21
Unit cell lengths60.057, 110.675, 157.490
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution9.989 - 1.600
R-factor0.1635
Rwork0.161
R-free0.20430
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4plp
RMSD bond length0.008
RMSD bond angle1.149
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.20)
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]90.55247.7531.590
High resolution limit [Å]1.5104.7701.510
Rmerge0.0585.201
Rmeas0.2470.0637.132
Rpim0.0990.0244.844
Total number of observations737330374478678
Number of reflections133537
<I/σ(I)>619.90.1
Completeness [%]80.999.821.1
Redundancy5.56.71.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.8291Na-acetate, ammonium acetate, PEG 10000, NDSB-201, 1,5-diaminopentane

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