4XQ9
Crystal Structure of the Homospermidine Synthase (HSS) from Blastochloris viridis in Complex with NAD
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID23-1 |
| Synchrotron site | ESRF |
| Beamline | ID23-1 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2012-05-01 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.9763 |
| Spacegroup name | P 2 21 21 |
| Unit cell lengths | 60.057, 110.675, 157.490 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 9.989 - 1.600 |
| R-factor | 0.1635 |
| Rwork | 0.161 |
| R-free | 0.20430 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4plp |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.149 |
| Data reduction software | XDS |
| Data scaling software | SCALA (3.3.20) |
| Phasing software | MOLREP |
| Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 90.552 | 47.753 | 1.590 |
| High resolution limit [Å] | 1.510 | 4.770 | 1.510 |
| Rmerge | 0.058 | 5.201 | |
| Rmeas | 0.247 | 0.063 | 7.132 |
| Rpim | 0.099 | 0.024 | 4.844 |
| Total number of observations | 737330 | 37447 | 8678 |
| Number of reflections | 133537 | ||
| <I/σ(I)> | 6 | 19.9 | 0.1 |
| Completeness [%] | 80.9 | 99.8 | 21.1 |
| Redundancy | 5.5 | 6.7 | 1.7 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 291 | Na-acetate, ammonium acetate, PEG 10000, NDSB-201, 1,5-diaminopentane |






