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4XFR

Crystal structure of a domain of unknown function (DUF1537) from Bordetella bronchiseptica (BB3215), Target EFI-511620, with bound citrate, domain swapped dimer, space group P6522

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-06-12
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 65 2 2
Unit cell lengths77.637, 77.637, 479.012
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution36.550 - 2.000
R-factor0.1912
Rwork0.188
R-free0.24330
Structure solution methodSAD
RMSD bond length0.013
RMSD bond angle1.408
Data scaling softwareAimless (0.1.27)
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]479.010479.0102.050
High resolution limit [Å]2.0008.9402.000
Rmerge0.0890.0440.807
Rpim0.0190.0080.246
Total number of observations11945312595235606
Number of reflections59286
<I/σ(I)>24.168.92.6
Completeness [%]99.299.594
Redundancy20.129.38.8
CC(1/2)0.9990.9990.718
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5298Protein (39.6 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT,); Reservoir (MCSG2(A9); 0.1 M tri-Sodium Citrate pH 5, 20 %(w/v) PEG 6000); Cryoprotection (80% Reservoir, 20% ethylene glycol)

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PDB entries from 2024-05-15

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