4XDZ
Holo structure of ketol-acid reductoisomerase from Ignisphaera aggregans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.579, 90.753, 69.525 |
Unit cell angles | 90.00, 100.25, 90.00 |
Refinement procedure
Resolution | 68.415 - 1.150 |
R-factor | 0.1582 |
Rwork | 0.157 |
R-free | 0.18950 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4kqx |
RMSD bond length | 0.024 |
RMSD bond angle | 2.461 |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 68.415 | 39.008 | 1.210 |
High resolution limit [Å] | 1.150 | 3.630 | 1.150 |
Rmerge | 0.036 | 0.870 | |
Rmeas | 0.096 | ||
Rpim | 0.054 | 0.024 | 0.643 |
Total number of observations | 662948 | 23203 | 72015 |
Number of reflections | 236179 | ||
<I/σ(I)> | 6.9 | 26.1 | 1.1 |
Completeness [%] | 95.0 | 97.2 | 82.4 |
Redundancy | 3 | 3.1 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 295 | 0.1 M bis-tris pH 6, 22% polyethylene glycol monomethylether 5000 |