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4X8Q

X-ray crystal structure of AlkD2 from Streptococcus mutans

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2013-03-29
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 21 21 21
Unit cell lengths51.016, 65.091, 87.497
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.153 - 1.729
R-factor0.1528
Rwork0.152
R-free0.16800
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3l9t
RMSD bond length0.006
RMSD bond angle0.974
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1819))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.760
High resolution limit [Å]1.7294.6901.730
Rmerge0.0640.0360.383
Total number of observations250066
Number of reflections31143
<I/σ(I)>11.84.8
Completeness [%]99.198.284.1
Redundancy87.37.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.729418% (w/v) PEG 3350, 200 mM sodium phosphate, pH 4.7

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