4X3R
Avi-GCPII structure in complex with FITC-conjugated GCPII-specific inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-07-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 101.710, 130.163, 159.536 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.860 |
R-factor | 0.1493 |
Rwork | 0.148 |
R-free | 0.18040 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ngp |
RMSD bond length | 0.020 |
RMSD bond angle | 2.032 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.400 | 1.970 | |
High resolution limit [Å] | 1.860 | 5.540 | 1.860 |
Rmerge | 0.115 | 0.079 | 0.672 |
Rmeas | 0.131 | 0.090 | 0.767 |
Total number of observations | 397397 | ||
Number of reflections | 88586 | 3531 | 14036 |
<I/σ(I)> | 7.98 | 18.85 | 1.93 |
Completeness [%] | 99.5 | 98.5 | 98.4 |
Redundancy | 4.49 | 4.34 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 289.15 | 33% pentaerythritol propoxylate (Hampton Research), 1.5% PEG 3350 (Fluka), 100 mM Tris HCl |