4X2R
Crystal structure of PriA from Actinomyces urogenitalis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9788 |
Spacegroup name | P 41 |
Unit cell lengths | 76.020, 76.020, 43.179 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.531 - 1.050 |
R-factor | 0.1228 |
Rwork | 0.123 |
R-free | 0.14100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1vzw |
RMSD bond length | 0.014 |
RMSD bond angle | 1.603 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.070 |
High resolution limit [Å] | 1.050 | 1.050 |
Rmerge | 0.063 | 0.584 |
Number of reflections | 114288 | |
<I/σ(I)> | 17.35 | 1.88 |
Completeness [%] | 99.5 | 94.9 |
Redundancy | 5.4 | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.2 M Li2SO4, 0.1 M CAPS:NaOH pH 10.5, 1.2 M/NaH2PO4, 0.8 M K2HPO4, cryo 2.4 M K2HPO4 |