4X1X
Crystal structure of RHDVb P domain in complex with Lewis Y
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-09-10 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.984463 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 59.440, 84.150, 62.660 |
Unit cell angles | 90.00, 110.11, 90.00 |
Refinement procedure
Resolution | 48.220 - 1.600 |
R-factor | 0.1561 |
Rwork | 0.154 |
R-free | 0.18450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4x1w |
RMSD bond length | 0.005 |
RMSD bond angle | 1.081 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.220 | 1.590 | |
High resolution limit [Å] | 1.550 | 6.940 | 1.550 |
Rmerge | 0.061 | 0.026 | 0.484 |
Rmeas | 0.085 | 0.037 | 0.671 |
Total number of observations | 243456 | ||
Number of reflections | 153487 | 1744 | 10733 |
<I/σ(I)> | 7.46 | 22.18 | 1.34 |
Completeness [%] | 92.8 | 94.1 | 87.3 |
Redundancy | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4 | 291 | Lithium chloride, PEG 6000, Citric Acid |