4WUT
CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM AGROBACTERIUM VITIS (Avi_5133, TARGET EFI-511220) WITH BOUND D-FUCOSE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-25 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.188, 69.367, 92.434 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 26.929 - 1.500 |
R-factor | 0.1854 |
Rwork | 0.184 |
R-free | 0.20680 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.262 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.730 | 42.730 | 1.530 |
High resolution limit [Å] | 1.500 | 8.220 | 1.500 |
Rmerge | 0.093 | 0.083 | 0.757 |
Rpim | 0.027 | 0.029 | 0.222 |
Total number of observations | 606632 | 1607 | 29759 |
Number of reflections | 50200 | ||
<I/σ(I)> | 16.1 | 22.9 | 3 |
Completeness [%] | 99.6 | 58.8 | 100 |
Redundancy | 12.1 | 7.1 | 12.1 |
CC(1/2) | 0.998 | 0.993 | 0.926 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 298 | Protein (29.0 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Fucose); Reservoir (0.2 M Calcium Acetate 0.1 M MES pH 6.0, 20 %(w/v) PEG 8000 ); Cryoprotection (80% (50%) Peg 3350, 20% Reservoir |