4WSO
X-ray crystal structure of a nicotinate nucleotide adenylyltransferase from Burkholderia thailandensis bound to NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-18 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97740 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 127.200, 91.320, 60.130 |
Unit cell angles | 90.00, 116.88, 90.00 |
Refinement procedure
Resolution | 37.963 - 2.050 |
R-factor | 0.2032 |
Rwork | 0.201 |
R-free | 0.23830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1k4m |
RMSD bond length | 0.002 |
RMSD bond angle | 0.678 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | BALBES |
Refinement software | PHENIX (phenix.refine: dev_1810) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.100 | |
High resolution limit [Å] | 2.050 | 9.170 | 2.050 |
Rmerge | 0.098 | 0.026 | 0.477 |
Rmeas | 0.117 | 0.031 | 0.572 |
Total number of observations | 119578 | ||
Number of reflections | 37482 | 411 | 2826 |
<I/σ(I)> | 10.45 | 36.05 | 2.87 |
Completeness [%] | 97.0 | 87.8 | 99.1 |
Redundancy | 3.19 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.2 | 289 | JCSG+ C1: 0.1 M sodium phosphate pH 4.2, 0.2 M sodium chloride, 20% PEG 8000; ButhA.00448.a.A1.PS01231 at 20 mg/ml |