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4WSA

Crystal structure of Influenza B polymerase bound to the vRNA promoter (FluB1 form)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-04-04
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9730
Spacegroup nameP 32 2 1
Unit cell lengths199.700, 199.700, 252.680
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.978 - 3.400
R-factor0.2304
Rwork0.229
R-free0.26530
Structure solution methodSIRAS
RMSD bond length0.003
RMSD bond angle0.657
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1760))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.520
High resolution limit [Å]3.4003.400
Rmerge0.1211.300
Number of reflections79266
<I/σ(I)>12.61.5
Completeness [%]98.589.9
Redundancy11.85.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP9281FluB polymerase was concentrated to 9 mg per ml (37 microM) in a buffer containing 500 mM NaCl, 50 mM Hepes pH 7.5, 5% glycerol and 2mM Tris(2-carboxyethyl)phosphine (TCEP), and mixed with 40 microM vRNA for crystallization in hanging drops at 4 C. A trigonal crystal form (FluB1) was obtained by mixing polymerase with nucleotides 5-18 of the 3 prime end and 1-14 of the 5 prime end of the vRNA in a condition containing 0.1 M bicine pH 9.0, 10% MPD.

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