4WRC
Crystal Structure of Surfactant Protein-A DEDN Mutant (E171D/P175E/R197N/K203D)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-01-17 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | H 3 2 |
Unit cell lengths | 68.774, 68.774, 168.852 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 13.644 - 1.800 |
R-factor | 0.2088 |
Rwork | 0.205 |
R-free | 0.24260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB code 3PAK |
RMSD bond length | 0.011 |
RMSD bond angle | 1.208 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 15.000 | 15.000 | 1.860 |
High resolution limit [Å] | 1.800 | 3.862 | 1.800 |
Rmerge | 0.065 | 0.044 | 0.473 |
Total number of observations | 155412 | ||
Number of reflections | 14534 | ||
<I/σ(I)> | 27.1 | ||
Completeness [%] | 99.4 | 95.2 | 99.9 |
Redundancy | 10.7 | 9.6 | 9.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 290 | DEDN (17 mg/ml) crystallized in hanging drops from a reservoir solution of 0.2 M calcium chloride and 14% (w/v) PEG 3,350. Before freezing, crystals were soaked in reservoir solution supplemented with 1.5 M 1,6-hexanediol as a cryoprotectant |