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4WOK

Crystal structure of UDP-glucose 4-epimerase from Brucella ovis in complex with NAD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyCCD
Collection date2010-10-06
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameI 2 2 2
Unit cell lengths76.480, 86.460, 126.850
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.230 - 1.850
R-factor0.1686
Rwork0.167
R-free0.19930
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2c20 modified with CCP4 program CHAINSAW
RMSD bond length0.008
RMSD bond angle1.136
Data reduction softwareXDS
Data scaling softwareXSCALE (2.5.6)
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0001.900
High resolution limit [Å]1.8508.2701.850
Rmerge0.0350.0190.556
Rmeas0.0400.0210.693
Total number of observations170114
Number of reflections361824572625
<I/σ(I)>26.3987.592.01
Completeness [%]99.797.299.1
Redundancy4.72.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5290MCSG1 screen, g11 40% PEG 300, 100mM NaPhosphate pH 4.2; BrovA.00085.c.B1.PS02133 at 15mg/ml, supplemented with 2.5mM NAD; direct cryo; tray 257996g11, puck kpy8-8

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PDB entries from 2024-05-15

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