4WOK
Crystal structure of UDP-glucose 4-epimerase from Brucella ovis in complex with NAD
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-10-06 |
Detector | RIGAKU SATURN 944+ |
Wavelength(s) | 1.5418 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 76.480, 86.460, 126.850 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.230 - 1.850 |
R-factor | 0.1686 |
Rwork | 0.167 |
R-free | 0.19930 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2c20 modified with CCP4 program CHAINSAW |
RMSD bond length | 0.008 |
RMSD bond angle | 1.136 |
Data reduction software | XDS |
Data scaling software | XSCALE (2.5.6) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.900 | |
High resolution limit [Å] | 1.850 | 8.270 | 1.850 |
Rmerge | 0.035 | 0.019 | 0.556 |
Rmeas | 0.040 | 0.021 | 0.693 |
Total number of observations | 170114 | ||
Number of reflections | 36182 | 457 | 2625 |
<I/σ(I)> | 26.39 | 87.59 | 2.01 |
Completeness [%] | 99.7 | 97.2 | 99.1 |
Redundancy | 4.7 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 290 | MCSG1 screen, g11 40% PEG 300, 100mM NaPhosphate pH 4.2; BrovA.00085.c.B1.PS02133 at 15mg/ml, supplemented with 2.5mM NAD; direct cryo; tray 257996g11, puck kpy8-8 |