4WMO
Selenomethionine derivative of Xenopus laevis embryonic epidermal lectin carbohydrate-binding domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-05-31 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97924 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 123.654, 111.069, 123.611 |
Unit cell angles | 90.00, 119.72, 90.00 |
Refinement procedure
Resolution | 30.087 - 2.300 |
R-factor | 0.1612 |
Rwork | 0.160 |
R-free | 0.18810 |
Structure solution method | SAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.170 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.400 | 30.400 | 2.380 |
High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
Rmerge | 0.098 | 0.625 | |
Rmeas | 0.180 | 0.105 | 0.670 |
Rpim | 0.065 | 0.039 | 0.241 |
Total number of observations | 991049 | ||
Number of reflections | 129043 | ||
<I/σ(I)> | 4.1 | 2.6 | |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 7.7 | 7.4 | 7.7 |
CC(1/2) | 0.994 | 0.897 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 100 mM Tris-HCl, 20-24% PEG 400 |