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4WKB

Crystal structure of Vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with methylthio-DADMe-Immucillin-A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Detector technologyCCD
Collection date2014-08-21
DetectorADSC QUANTUM 315r
Wavelength(s)1.075
Spacegroup nameP 1 21 1
Unit cell lengths53.192, 72.002, 61.648
Unit cell angles90.00, 110.32, 90.00
Refinement procedure
Resolution30.000 - 1.370
R-factor0.1654
Rwork0.165
R-free0.18300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3dp9
RMSD bond length0.007
RMSD bond angle1.367
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.390
High resolution limit [Å]1.3703.7201.370
Rmerge0.0480.0340.220
Total number of observations330001
Number of reflections85031
<I/σ(I)>16.26.77
Completeness [%]93.069.299.1
Redundancy3.93.83.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP295Protein (10 mg/mL); Reservoir (0.1M di-ammonium hydrogen citrate and 15% PEG 3350); Cryoprotection (20% (v/v) glycerol)

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