4WHX
X-ray Crystal Structure of an Amino Acid Aminotransferase from Burkholderia pseudomallei Bound to the Co-factor Pyridoxal Phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-08-13 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.140, 230.350, 77.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.254 - 2.050 |
R-factor | 0.1639 |
Rwork | 0.162 |
R-free | 0.19750 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.903 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1769)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.100 | |
High resolution limit [Å] | 2.050 | 9.170 | 2.050 |
Rmerge | 0.056 | 0.017 | 0.509 |
Rmeas | 0.064 | 0.020 | 0.579 |
Total number of observations | 485486 | ||
Number of reflections | 115291 | 1347 | 8559 |
<I/σ(I)> | 17.99 | 55.53 | 2.58 |
Completeness [%] | 98.0 | 90.3 | 99.5 |
Redundancy | 4.21 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 290 | JCSG+ well H8 - 0.1 M BIS-TRIS pH 5.50, 0.2 M sodium chloride, 25% PEG3350, cryoprotected in 20% EG |