4WC0
tRNA-processing enzyme with ATP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2013-02-08 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1.0 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.710, 109.060, 85.090 |
Unit cell angles | 90.00, 109.84, 90.00 |
Refinement procedure
Resolution | 19.818 - 3.100 |
R-factor | 0.2154 |
Rwork | 0.213 |
R-free | 0.26300 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wby |
RMSD bond length | 0.002 |
RMSD bond angle | 0.649 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.180 | |
High resolution limit [Å] | 3.100 | 13.840 | 3.100 |
Rmerge | 0.109 | 0.017 | 1.501 |
Rmeas | 0.124 | 0.020 | 1.721 |
Total number of observations | 76936 | ||
Number of reflections | 18119 | 201 | 1309 |
<I/σ(I)> | 14.32 | 64.76 | 1.26 |
Completeness [%] | 99.4 | 91.8 | 96.1 |
Redundancy | 4.2 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PEGMME550, sodium chloride, Tris-Cl |