4W5H
New structural conformations of adenylate kinase from Streptococcus pneumoniae D39
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-04-08 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.508, 54.331, 62.711 |
Unit cell angles | 90.00, 118.85, 90.00 |
Refinement procedure
Resolution | 29.060 - 1.960 |
R-factor | 0.181 |
Rwork | 0.177 |
R-free | 0.21900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ntz |
RMSD bond length | 0.005 |
RMSD bond angle | 0.885 |
Refinement software | PHENIX ((PHENIX.REFINE: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.060 | 1.990 |
High resolution limit [Å] | 1.960 | 1.960 |
Rmerge | 0.065 | 0.210 |
Number of reflections | 15454 | |
<I/σ(I)> | 12.3 | 6.3 |
Completeness [%] | 98.9 | 96.1 |
Redundancy | 4.5 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 1.0 M sodium citrate, 0.1M HEPES pH 7.5 |