4UAT
Crystal structure of CbbY (mutant D10N) from Rhodobacter sphaeroides in complex with Xylulose-(1,5)bisphosphate, crystal form I
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-05-07 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 0.97639 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 35.419, 51.468, 122.083 |
Unit cell angles | 90.00, 94.06, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.300 |
R-factor | 0.1235 |
Rwork | 0.121 |
R-free | 0.16850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uar |
RMSD bond length | 0.021 |
RMSD bond angle | 2.049 |
Data reduction software | XSCALE |
Data scaling software | SCALA (3.3.16) |
Phasing software | MOLREP (10.2.35) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 121.776 | 40.592 | 1.370 |
High resolution limit [Å] | 1.300 | 4.110 | 1.300 |
Rmerge | 0.026 | 0.839 | |
Rmeas | 0.074 | ||
Rpim | 0.033 | 0.012 | 0.451 |
Total number of observations | 506407 | 18634 | 63459 |
Number of reflections | 107256 | ||
<I/σ(I)> | 13.2 | 50.7 | 1.9 |
Completeness [%] | 99.5 | 99.8 | 97.4 |
Redundancy | 4.7 | 5.2 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 25 % PEG-550MME, 0.1 M MES-NaOH pH 6.5 |