4U7M
LRIG1 extracellular domain: Structure and Function Analysis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-13 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.954 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 121.040, 121.040, 115.800 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.957 - 2.757 |
R-factor | 0.207 |
Rwork | 0.205 |
R-free | 0.25330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1g1c |
RMSD bond length | 0.006 |
RMSD bond angle | 0.870 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.910 | |
High resolution limit [Å] | 2.757 | 8.140 | 2.757 |
Rmerge | 0.167 | 0.045 | 3.000 |
Rmeas | 0.177 | 0.048 | 3.174 |
Total number of observations | 213196 | ||
Number of reflections | 22552 | 989 | 3103 |
<I/σ(I)> | 11.68 | 36.35 | 0.88 |
Completeness [%] | 98.3 | 99.1 | 89.2 |
Redundancy | 9.4 | 9.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7 | 293 | 0.8 M sodium succinate pH 7.0 |