4U6X
Crystal Structure of HLA-A*0201 in complex with ALQDA, a 15 mer self-peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-19 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 51.043, 79.063, 54.903 |
Unit cell angles | 90.00, 111.11, 90.00 |
Refinement procedure
Resolution | 39.532 - 1.680 |
R-factor | 0.1653 |
Rwork | 0.163 |
R-free | 0.20160 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3gso |
RMSD bond length | 0.007 |
RMSD bond angle | 1.085 |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 51.218 | 47.617 | 1.770 |
High resolution limit [Å] | 1.680 | 5.310 | 1.680 |
Rmerge | 0.026 | 0.695 | |
Rmeas | 0.076 | ||
Rpim | 0.031 | 0.012 | 0.318 |
Total number of observations | 262331 | 8168 | 37152 |
Number of reflections | 46457 | ||
<I/σ(I)> | 17.7 | 51.5 | 2.6 |
Completeness [%] | 99.7 | 99.8 | 98.5 |
Redundancy | 5.6 | 5.3 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.5 | 277 | 18-22.5% PEG 3350, Hepes pH 7.5, 0.1M MgCl2 |