4U3P
Octameric RNA duplex co-crystallized with strontium(II)chloride
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-31 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.60 |
Spacegroup name | H 3 |
Unit cell lengths | 45.480, 45.480, 57.980 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.580 - 1.866 |
R-factor | 0.1852 |
Rwork | 0.180 |
R-free | 0.22910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u3l |
RMSD bond length | 0.004 |
RMSD bond angle | 0.776 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.580 | 1.932 |
High resolution limit [Å] | 1.866 | 1.866 |
Rmerge | 0.036 | 0.471 |
Number of reflections | 3728 | |
<I/σ(I)> | 34.84 | 4.06 |
Completeness [%] | 99.8 | 97.96 |
Redundancy | 9.4 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293.15 | 28% PEG 8000, 0.2 M strontium chloride, 0.2 M ammonium acetate, 0.01 M magnesium acetate, 0.05 M sodium cacodylate buffer pH 6.5 |