4U0W
Crystal structure of YvoA from Bacillus subtilis in complex with N-acetylglucosamine-6-phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-12-17 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.91841 |
Spacegroup name | H 3 2 |
Unit cell lengths | 99.142, 99.142, 353.978 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.727 - 2.001 |
R-factor | 0.2077 |
Rwork | 0.205 |
R-free | 0.25420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2wv0 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.087 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.730 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.089 | 1.260 |
Number of reflections | 45784 | |
<I/σ(I)> | 20.15 | 2.39 |
Completeness [%] | 99.9 | 99.8 |
Redundancy | 11.2 | 11.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 292.15 | 100 mM Na-HEPES salt, 200 mM ammonium chloride, 25 % (v/v) glycerol ethoxylate |